Sentence examples for background frequency of a from inspiring English sources

Overlapping copies of the same word are not counted, and the final background frequency of a given word is set as the average of the frequencies of its 1-neighbors.

Enrichment is the fold-change relative to the background frequency of a pathway annotation.

Enrichment is the fold-change relative to the background frequency of a GO-term annotation.

The χ2 algorithm from Hishigaki et al. extended this idea by also considering the background frequency of a functional term [ 16].

If f x is the background frequency of a k-mer x, and f′ x the observed frequency, the KL divergence is computed as where the sum is over all k-mers.

Sample size calculations were performed assuming that a 10% background frequency of an HLA allele would provide 80% power (α =.05) to detect an odds ratio (OR) of 3.0 (and 90% power to detect an OR of 3.4).

It could be argued that susceptible individuals will always fall outside any threshold response because threshold responses are always considered in terms of background levels and the background level for susceptible individuals is (by definition) above the normal background frequency of an adverse outcome, such as cancer.

However, uncaging glutamate on granule cells in pilocarpine-treated mice that survived SE resulted in a transient increase in EPSC frequency from a background frequency of 3.4±1.1 Hz to a peak frequency of 78.18±8.91 Hz 100 200 ms after uncaging (n = 11; Fig. 7B).

2 where x i,j is an ith nucleotide of a hexamer j appeared in an upstream of a gene, p m (x i,j ) is a frequency of x i,j at a position i of a PWM for a motif m, and q(x i,j ) is a background frequency of x i,j calculated from a GC content of an input sequence.

The information content Di of site i is defined as

The mutation in two large pedigrees originating from Australia and Austria fell on a shared eight single nucleotide polymorphism (SNP) haplotype, spanning a 0.1 Mb region and with a background frequency of 2% in the European population, suggesting a recent founder mutation between the two families.