Sentence examples for background correction methods and from inspiring English sources

We study 20 different preprocessing methods, which are the combination of five background correction methods and four normalization methods.

Thus, it is important to understand the assumptions underlying background correction methods, and test those assumptions, before blindly applying any preprocessing method.

In addition, Ritchie et al. [ 18] only compare background correction methods and do not demonstrate how normalization methods will affect and interact with different background correction methods.

Globally, these methods outperform the previously developed background correction methods and in some cases seem to improve data quality almost as well as the best Infinium I/II-type bias corrections.

In order to further compare the performances of different normalization and background correction methods, at each p-value cutoff point we calculate the average of each statistical measurement for each normalization method (across five different background correction methods) and for each background correction method (across four different normalization methods).

Weight based filtering; using the ratio uncertainty to reduce the impact of "bad" spots without removing them completely found the highest numbers of differentially expressed genes regardless of background correction method and blocking agent dose.

We would recommend using PBC, BMIQ or the background correction methods developed by Triche and collaborators.

Some software packages allow the user to interchange background correction methods with the normalization and summarization methods (e.g. Bioconductor [ 4]).

Two plots in the bottom panel are used for the comparisons of five different background correction methods using measurements T.stat and AUC.

We therefore detail here mainly these methods, before presenting briefly the color bias and background correction methods also available to date.

Nevertheless, new background correction methods have recently been developed by Triche and coworkers and implemented in the methylumi package (such as 'Noob' and 'Normexp') [ 17].