Sentence examples for aware methods from inspiring English sources

To overcome this limitation, many species tree aware methods have been developed for gene tree inference.

Multiple sequence alignments (MSAs) were generated using both distance and evolutionary aware methods [ 38, 39] ensuring a comprehensive exploration of alignment space.

MowgliNNI, AnGST and TreeFix-DTL are the three species tree aware methods available for gene tree error correction of transferred gene families.

These results show that all of the species tree aware methods achieve better accuracy than the species tree unaware method PhyML, which is to be expected as they are given additional information in the form of the species tree.

The results for the species tree aware methods are more variable: ALE, based on an explicit probabilistic approach, exhibits a median difference of zero and produces only a few examples of overfitting.

Moreover, due to the complexity of the reconciliation model based on duplication, transfer and loss (DTL-reconciliation model), there has been little systematic development of species tree aware methods for handling gene families with transfer.

Unfortunately, some are far-fetched — a new socially aware method for calculating the gross domestic product, for example — and the final chapter is platitudinously entitled "Toward a New Society".

Moreover, we complement these algorithms with device energy aware method to lengthen the available time of video services.

Secondly we applied the "phylogenetically aware" method PRANK with the '+F' option to account for insertion deletion events [ 38].

We have presented a detailed description of the TERA algorithm, a parsimony-based species tree aware method of gene tree reconstruction.

As described in the introduction, our goal is to create a species tree aware method for reconstructing gene phylogenies that uses information from both gene sequences and from the reconciliation with a species tree.