Your English writing platform
Discover LudwigExact(6)
Unfortunately, some are far-fetched — a new socially aware method for calculating the gross domestic product, for example — and the final chapter is platitudinously entitled "Toward a New Society".
Moreover, we complement these algorithms with device energy aware method to lengthen the available time of video services.
Secondly we applied the "phylogenetically aware" method PRANK with the '+F' option to account for insertion deletion events [ 38].
We have presented a detailed description of the TERA algorithm, a parsimony-based species tree aware method of gene tree reconstruction.
As described in the introduction, our goal is to create a species tree aware method for reconstructing gene phylogenies that uses information from both gene sequences and from the reconciliation with a species tree.
Results: Here, we present the Tree Estimation using Reconciliation (TERA) algorithm, a parsimony based, species tree aware method for gene tree reconstruction based on a scoring scheme combining duplication, transfer and loss costs with an estimate of the sequence likelihood.
Similar(6)
To overcome this limitation, many species tree aware methods have been developed for gene tree inference.
Multiple sequence alignments (MSAs) were generated using both distance and evolutionary aware methods [ 38, 39] ensuring a comprehensive exploration of alignment space.
MowgliNNI, AnGST and TreeFix-DTL are the three species tree aware methods available for gene tree error correction of transferred gene families.
These results show that all of the species tree aware methods achieve better accuracy than the species tree unaware method PhyML, which is to be expected as they are given additional information in the form of the species tree.
Each of the species tree aware methods used in this study, TreeFix-DTL, AnGST, MowgliNNI, NOTUNG and TreeFix, require as input a gene tree reconstructed using sequence-only methods.
Write better and faster with AI suggestions while staying true to your unique style.
Since I tried Ludwig back in 2017, I have been constantly using it in both editing and translation. Ever since, I suggest it to my translators at ProSciEditing.

Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com