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Generally speaking, we avoid the assignment of formal charges, since this implies, in many cases, assumptions about the oxidation numbers of atoms or charge distribution within chemical moieties that are not always obvious, especially if we want to make such assumptions in a more or less automated way.
For each sample with spike-ins, the linear regression forcing the regression through 0 (to avoid the assignment of positive copies per cell of genes with 0 FPKM values) was used to calculate the relationship between log2 transformed FPKM values and log2 transformed actual added copies of the spike-ins.
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By using the metabolome of the relevant organism or close species, these methods capitalize on biological relevance, avoiding the assignment of artificial and non-physiological functions.
The research midwives collected all outcome data and these were reviewed by a principal investigator, avoiding the assignment errors associated with using routine hospital coding.
In fact, he didn't sign up for advanced placement English this year just to avoid the summer assignment of six books.
We now restrict our analysis to the promoter regions, in order to avoid the ambiguous assignment of peaks to genes.
More frequent sampling would avoid the false assignment of very high fitnesses to mutant haplotypes, and should be carried out where large selective differences are expected.
An alternative treatment is given in Incremental Typed Logic (ITL), an extension to typed logic of a 'stack semantics' that is based on variable free indexing and that avoids the destructive assignment problem.
For this reason, a number of useful criteria have been proposed in order to avoid the mistake of incorrect assignment of pathogenicity to a mutation [12].
In our analysis, the use of a new version of the TRAM software (TRAM 1.1) allowed us to map thousands of previously uncharacterized microarray probes and to avoid the errors in probe assignment to human loci often present in the data supplied by the manufacturer along with the platforms.
To avoid the observer factor in landmark assignment, we selected randomly 14-16 specimens (hemimandible) from a number of populations studied by [ 21] and digitized them all for a combined analysis with collections from Heligoland by the same person (H.B).
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