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Dendrogram was drawn using the UPGMA Unweighted Pair Group Methodd using Arithmetic averages) implemented in Bionumerics 5.1 version software (Applied Maths, Sint-Marten-Latems, Belgium) following the methods described in user's manual and with missing data coded as "0".
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For efficient calculation of powder averages, we implemented interpolation method of Alderman, Solum, and Grant, as well as recently introduced fast Wigner transform interpolation technique.
Raw expression data were normalized using Robust Multichip Average as implemented in the Bioconductor affy package.
A local time-stepping method and a residual averaging are implemented to accelerate the density residual convergence.
The consistency has increased slightly since a 4-reading average was implemented, and also if the stimulus to the microphones is loud and clear such that all 3 microphones detect it cleanly and accurately.
By means of the stiffness averaging method, implemented in the research oriented FEM (finite element method) code B2000, the developed model is able to simulate the NCFs mechanical performances.
Microarray raw gene expression data were background corrected, quantile normalized, and summarized for each of the 44,699 coding and 22,829 corresponding transcript clusters (genes) using Robust Multi-array Average (RMA 81 implemented in the oligo package82 using probe to transcript cluster assignments from the hta20sttranscriptcluster.db package of Bioconductor83.
For time-dependent effects of different specimens, a smoothing window of 14 days pre- and post-sampling on the basis of a weighted moving average was implemented.
For experiments involving calculations of "equivalent pressure" a 3-point moving average filter, implemented in Matlab 7.8, was used to reduce the noise in the tissue displacements due to pixelation.
On average, teachers implemented 64.1% (ranging 4.5 100%) of the 22 learning activities included in the analyses.
Affymetrix microarray data were normalized using the robust multi-array average algorithm implemented in the affy package [ 17].
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com