Exact(1)
First, we calculated a moving average of conservation values across 500-bp windows and identified a global maximum value (peak center) in the block.
Similar(59)
Per set, averages of conservation scores were calculated.
7C, D), S3, K5, I6, R9, L10, N36 seems to be well conserved, since only one residue, I6, was found to be variable (italic), and the rest exhibit an average index of conservation or highly conserved like R9 (bold).
Histone H4 (a highly conserved protein), SOD2 (a protein with an average degree of conservation) and Fibrinopeptide (a protein characterized by a low conservation level) were used as evolutionary markers [ 46].
Average frequency of conservation of the allosteric sites examined was found to be fairly low (~ 13%), hinting at the requirement of some degree of conformational flexibility.
For instance the average size of conservation areas may be increased, and network connectivity encouraged, by introducing a preference for cells adjacent to those already selected when ties are broken between cells that have identical complementarity and rarity values (Nicholls & Margules 1993).
The GERP score reflects the average degree of conservation of a nucleotide position among mammals.
Going deeply on AS behavior in different cultivars we were quite surprise to note that the conservation among them is definitely relevant, the average level of conservation that we have found is around 5 cultivars per alternative SJs events.
Based on the average degree of conservation observed from each CEG, the work in [ 33] divides the CEGs into four groups (group 1 has the least conserved CEGs while group 4 has the most conserved CEGs).
To examine whether cross-species conservation was in part an artefact of the high phastCons score, we estimated the average level of conservation observed for randomly selected short UTR sequences with high phastCons scores, comparing them with the aligned sequence in the other species for conservation.
In a systematic comparison of CAGE-defined mouse promoters with the promoters of human and dog orthologous genes, the average level of conservation peaked around the TSS at around 85% in rat and 65% in human, and declined rapidly towards the genomic background at around −300 and +100 relative to the TSS [ 9].
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