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The average number of sequencing reads was around 4.9 million.
Coverage for a defined amplicon is the average number of sequencing reads representing a given nucleotide in that amplicon.
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The average number of sequences was 22,331, 23,923, and 30,636 for groups 1, 2, and 3, respectively.
The differences between the sequence distributions also became apparent when the average number of sequences showing similarities to each section of the genome was compared.
The average number of sequence reads per individual was 425,000, although there was high variability amongst the 24 individuals (16K-842K) (Table 1).
The average number of sequence tag per 20 kb bin, Mi, was calculated for every 0.1% GC content, ignoring bins with no reads, bins with zero GC percent, and bins with over-abundant reads.
For the E1-E2 region, 11746 cloned sequences were obtained and average number of sequenced clones per sample for the treatment-naïve mono-infected group (HCV 0) was 105.74±21.43 whereas the average for HCV treated mono-infected patients who did not respond to a combined antiviral treatment with IFN-α plus ribavirin (HCV T) was 106.15±5.24.
The average number of sequences used in the cluster of the contigs varied slightly between libraries.
The average number of sequences per contig was 4.43 with the maximum being 35.
The average number of sequences in each group was ∼38, ranging from 21 to 57.
The average number of sequences in a multiple alignment was 32.
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