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We therefore checked these two genes and found that they behave normally: the fraction of experiments where they are over- and under-expressed is comparable to that of average genes (not shown).
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The average number of introns per gene (not shown) is in accordance with what has been described for other genes (3; 7) with the exception of the A. thaliana tetraspanins which have fewer introns per gene than the average in that species.
There was no functional class of genes that accumulated more SNPs than average (data not shown).
Gene upstream regions are indeed larger than downstream regions across the Aspergilli on average (data not shown).
No class of genes (e.g. outer membrane proteins) could be identified that showed more SNPs than the average (data not shown).
In addition, no significant difference was observed either with lipid loading genes or cholesterol transport genes (data not shown).
These values did not stray from the average of all M. truncatula genes (data not shown).
Comparison of the DU145 excisional biopsy cores generated average coefficients of 0.90 for all genes (n = 6,711 genes), and 0.99 for outliers (n = 363 genes)(data not shown).
However, on average, H3K4me3-marked genes are more strongly expressed than genes without H3K4me3, as described earlier for RefSeq genes (data not shown) [ 10].
Consistent with previous results (Costanzo et al. 2010), on average, individual duplicate genes have fewer epistatic interactions than single-copy genes (data not shown).
Three-hundred twenty-five genes on the array were defined as down regulated genes (data not shown).
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com