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The frequencies of lysine and arginine in the proteins encoded by RPLP1 and RPLP2 of Sub-cluster 1 were lower than their average frequencies in the proteins encoded by Main cluster genes.
The overall relative amino acid compositions for each kingdom in the two data sets are shown in Additional file 1, ordered by their average frequencies in the respective data set.
Average frequencies in over-/underexpression and mutation across protein families were generated for each cancer type by summing frequencies shown in Figure 1 (after changing the Log2 cutoff from 1 to 2 to focus on transcriptional changes of higher amplitude) and dividing by the total number of genes present within the indicated protein family.
In order to know whether the identified motif frequencies were random reflections of their average frequencies in the whole genome, we analyzed all the tetramer and hexamer motifs in the chromosomes of S. pombe, A. thaliana, Oryza sativa (rice), Z. mays, D. melanogaster, C. elegans, and H. sapiens (Additional file 5).
The dPear given two genomes, A and B, was calculated using the formula: d P e a r = 1 - r = 1 - Σ i A i - (A ) B i - (B ) ¯ / (Σ i A i - (A ) 2 ¯ Σ i B i - (B ) 2 ¯ ), where r is the Pearson's correlation coefficient; A i and B i correspond to the tuple i's frequencies in sequences A and B, respectively; and A and B correspond to the average frequencies in sequences A and B, respectively.
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If all digits do appear with the same average frequency in pi, then pi is a "normal" number — "normal" by the narrow mathematical definition of the word.
Men's health is not affected by the economic collapse in a substantial way, the average frequency in the diseases rises by only 4, 9% between 2007 and 2009 and increases by 7, 3% between 2009 and 2012.
The average distribution frequency of ACE D allele in patients with SRNS was 64.40%, and the average frequency in SSNS was 55.87%.
The average distribution frequency of ACE D allele in patients with SRNS was 64.40% and the average frequency in controls was 48.23%.
The average distribution frequency of ACE D allele in children with SSNS was 50.97%, and the average frequency in controls was 46.68%.
Fig. 7A shows this average frequency in decreasing order for two values of the modification probability p, as well as the corresponding DGBD.
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