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The average breeding value for the combination should be better than the average for the breed.
Our study of average breeding value for bill depth did not indicate any change across cohorts.
FM reduced the variance of the average breeding value of the mates of an individual.
Genetic improvement was calculated as the cumulative increase of the average breeding value (G ¯ ) in each generation.
Direct and indirect breeding values of an offspring were simulated as the average breeding value of its parents plus a Mendelian sampling deviation, sampled from a bivariate normal distribution.
The average breeding value in each generation was standardized and presented as a percentage of the genetic standard deviation in generation 0. The inbreeding coefficient was calculated for each individual in the pedigree using the function calcInbreeding from the R-package pedigree [ 28].
Similar(50)
Selection was based on high breeding values for body weight at harvest, with a corresponding control group selected on average breeding values of the population.
The slope of the regression between average breeding values against generation is stored at each iteration for both actual (reg1) and simulated (reg2) breeding values.
For example, the average breeding values for courtship display increased by 1 day, but this has to be related to the mean phenotypic value of 50 days.
Genomic estimated breeding values were more accurate and showed more within-family variation than parent average breeding values; for genomic estimated breeding values, 30 to 40% of the variation was due to within-family differences.
More specifically, for each iteration from the model, we computed the average breeding values per generation of (i) actual estimated breeding values from the population and (ii) simulated breeding values under drift (rbv function in MCMCglmm).
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com