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After LC-Q-TOF-MS measurement, EICs of the target analytes ([M + NH4]+ adducts) were automatically extracted by MassHunter Quantitative Analysis software with a m/ z extraction window of ±30 ppm (based on preliminary evaluation of the mass accuracy from raw data).
For NSABA and RT-PCR RNA was automatically extracted by the NucliSENS® easyMAG™ (bioMerieux, Nürtingen, Germany) using the manufacturer's extraction protocol for nasopharyngeal specimen, using 100 µl of specimen preincubated for 30 min at 37°C with 10 µl DNase and 12 µl DNase buffer (Promega, Germany).
Based on this localization, iris texture is automatically extracted by means of a cellular automata which evolved via the GrowCut technique.
Combining intensity information and deep features automatically extracted by the trained CNN from the original image, our proposed method could better simulate the diagnostic procedure operated by doctors and achieved state-of-art performance.
The base surface is estimated using normal smoothing and Poisson reconstruction, allowing a relief (which may lie on a smooth or textured input surface) to be automatically extracted by height thresholding.
Furthermore, the projected average 2-D atomic arrangement is automatically extracted by finding the atomic planes with the largest spacings.
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The outline of each growth cone in each frame (n=25,461) was automatically extracted, and parameterised by 250 evenly spaced points.
Frequently, manual annotation is supported by text mining by providing automatically extracted annotations which are later validated by the annotators.
After inserting the DVD containing HRCT data in the drive, the DICOM data were automatically extracted from the disc by OsiriX.
Chemical concentrations can now be automatically extracted from MR spectra by using sophisticated and well-documented time-domain and spectral frequency-fitting software packages such as LCModel (Stephen Provencher, Oakville, Ontario, Canada), a user-independent fitting routine based on a library of model spectra of all individual metabolites [ 31].
Numerical assessment of automated term-like phrases retrieval process efficiency done in the paper is calculated by comparing automatically extracted term-like phrases and those manually selected by experts.
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com