The phrase "atoms except for" is correct and usable in written English.
It can be used when specifying that all atoms are included in a statement or context, with the exception of certain ones.
Example: "All elements are composed of atoms except for noble gases, which are inert."
Alternatives: "atoms excluding" or "atoms aside from".
A structural fragment of 4 × 2 × 2 unit cells is represented; on the right half all the atoms except for H are omitted for clarity.
All atoms except for the H and Si atoms at the bottom were fully relaxed to optimize the surface total energy.
We derived the adsorption energies from calculating the total energy of the system including full relaxation of all Si atoms and H atoms (except for the bottom hydrogenated Si atoms) and the Ag adatom.
To provide insight why one iteration of ITKrM acts as contraction, assume again that we know all generating supports I n and that our current estimate for the dictionary consists of all generating atoms except for the first one, ψ k =ϕ k for k≥2.
We first considered all atoms except for hydrogens, and calculated the distances between all pairs of atoms.
The structure was refined with anisotropic temperature factors for non-hydrogen atoms, except for regions of increased mobility where the temperature factors were refined isotropically.
Not surprisingly, Glycine has the largest prediction error (75°/67° for phi/psi angles), which is mainly due to the fact that Glycine has no side-chain atom except for a proton.
EPR parameters for these models were computed by solving the coupled-perturbed self-consistent field equations as implemented in Orca 2.9.1, using the B3LYP hybrid functional and the TZVP basis set on all atoms except iron, for which CP PPP) was used.
2D structures of drugs were converted into hydrogen-suppressed molecular graphs where nodes were labeled with atom types except for hydrogen atoms and edges are labeled with bond types.
A planarity restraint was also added for all non-H atoms in the NMP molecule except for the central CH2 group.
The model of PTB2 with phosphorylated Ser (PTB2 pS610) was prepared with the SIDEpro server [ 26], with all atoms fixed except for Cβ and Oγ of Ser.
