Sentence examples for at one alignment from inspiring English sources

Any combination of the character states in the aligned sequences at one alignment column represents a so-called character[ 3], which is sometimes also called site pattern[ 4].

Given a reference alignment (and the superimposition of two proteins in the alignment), the local TM-score at one alignment position i is defined as follows: (4) where d i is the distance deviation between the two aligned residues at position i and d0 is a normalization constant depending only on protein length.

An average of 84% of reads per sample (min: 74.14%; max: 87.95%) reported at least one alignment to the transcriptome.

A total of 94% of the CM-probes had unique matches, whereas the rest had at least one alignment with e-value < e−10.

We have evaluated the nine classes of splicing events in clusters in which at least one alignment assembly incorporates a FL-cDNA.

The coverage is computed as the number of genome positions covered by at least one alignment divided by the genome length.

Additional file 1: Figure S2a and Sb shows those instances where the trees on the edit path are always within the confidence set of optimal trees of at least one alignment.

To identify miRNAs expressed in oyster haemocytes after neurotransmitter stimulation, a total of 6,820 reads which have at least one alignment in genome, were subjected to miRDeep2 software for prediction of the precursor sequence and secondary structure.

For each of the other excluded sequences at least one method reported more than one alignment with identity at or above the threshold.

Similar to Bowtie2, Stampy reports the single best alignment, selecting one result at random when more than one alignment shares the best mapping quality.

One alignment must start at the first base of the read (a1 =  r1).