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Repeated sequences were identified with REPuter 2.74 [ 67] using the -f (forward), -p (palindromic), and -allmax options at minimum lengths of 30 bp and were classified with REPEATFINDER [ 68].
Repeated sequences were identified with REPuter 2.74 [ 61] using the -f (forward) and -p (palindromic) options at minimum lengths of 30 bp and were classified with the Comparative Repeat Analysis program [ 62].
Similar(58)
The density of repeated elements in a given chloroplast genome was assessed with REPuter 2.74 [ 36] using the -f (forward), -p (palindromic), and -allmax options at minimum lengths (-l) of 30 bp and 45 bp.
Last year, anglers were permitted to catch seven fish each at a minimum length of 17 inches each.
The branch collapse option was set to collapse at a minimum length of zero.
AS reads were generated at a minimum length of 36 bp in each sample, although the first and last several bases were ignored to produce high quality reads at least 34 bp in length.
PCR was performed using BS-treated gDNA samples as template, and BS-specific primers that were designed at a minimum length of 20 bp against selected DMRs using the MethPrimer program.
Only sRNAs that were identified at a minimum length of 74 bp (3 consecutive probes) were considered.
The identification of repeat sequences was assessed with the following parameters: options at a minimum length of 50 bp and 90% or greater sequence identity.
The nearly two-fold difference at a minimum length of 18 bp was mostly due to the high abundance of trinucleotide SSRs in rice unigenes relative to wheat and barley.
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