The phrase "association testing with" is correct and usable in written English.
It can be used in contexts related to statistical analysis, genetics, or research where associations between variables or traits are being examined.
Example: "The researchers conducted association testing with various genetic markers to identify potential links to the disease."
Alternatives: "association analysis using" or "associative testing involving".
We provide a general framework for association testing with rare variants by combining mutation information across multiple variant sites within a gene and relating the enriched genetic information to disease phenotypes through appropriate regression models.
32 SNPs in and around SNCA were selected for association testing with MSA (Figure 1, Table 3).
For association testing with blood pressure and hypertension we selected individuals from Phase 5 as diabetes ascertainment and blood pressure medication records were most complete from this phase.
A two-tailed Fisher's exact test was also used for gene-based association testing with losses and gains considered both separately and together.
For association testing with blood pressure and hypertension we selected individuals from wave 2. Cases and normotensive controls were defined using the same criteria as the Whitehall II study.
Further association testing with other cognitive abilities (see SOM) showed an effect of markers in both the intron 5 and intron 15 19, but also an effect of the age at testing.
We study the power of different association tests with a variety of disease models and block-partitioning criteria.
The fact that association tests with rare variants are performed at the gene level rather than at the variant level poses unprecedented challenges in the meta-analysis.
Beagle version 3.0 uses a hidden Markov model (HMM) to infer haplotype phase with both typed and untyped SNPs, and perform association test with the inferred haplotypes [18].
In summary, we report the results of our case-control and family-based GD-HLA association tests, with some strong supporting evidence from previous studies in Asians.
We evaluated the performances of various association tests with three strategies: 1) test only the 41 genotyped SNPs; 2) test both the genotyped and imputed SNPs; 3) test the ideal genotypes (all the 250 genotyped SNPs).
