The phrase "associated set of genes" is correct and usable in written English.
It can be used in contexts related to genetics, biology, or discussions about gene functions and relationships.
Example: "Researchers identified an associated set of genes that contribute to the development of the disease."
Alternatives: "related group of genes" or "connected set of genes".
Pathway analysis of transcription data indicated the functionally associated set of genes most differentially regulated in the cardiac muscle were those of the mitochondrial ETC (Figure 2A).
In response to environmental and developmental cues, TFBMs are bound by their cognate transcription factors, and, as a result, co-expression of the associated set of genes takes place, by activation or inhibition of the transcription machinery [ 4- 7].
For each GO term i, we associate the set of genes in 𝒢 that are annotated by GO terms which are ancestors of i; we call the size of this set the rank of term i with respect to set 𝒢, and denote it by Rank𝒢(i).
The automated approach relies on employing the Gene Ontology (GO), queried via the GATHER system [ 14], to identify pathways associated with sets of genes.
Inside this class, and by applying a GREAT analysis [ 34] we associated corresponding sets of genes to CE CGIs (7436), HIR CGIs (1190) and 5SLR CGIs (214) (see Materials and Methods).
This software consists of a curated database and several analysis tools to obtain pathways associated with a set of genes.
We then analyzed the GO terms associated with the set of genes that showed differential regulation only for high-dose SSR exposure (Fig. 4).
Gene ontology and pathway terms (www.geneontology.org) were examined to identify biological themes associated with each set of genes regulated by rapamycin.
Interestingly, the biological functions associated with the set of genes identified by text mining as targets of our 63-set miRNAs bear a striking similarity to those functions identified by pathway analysis of the predicted target set.
In contrast the uniformly unmethylated resorts are not significantly associated with either set of genes.
PASTAA results for TFs associated with input set of genes ranked by p-values.
