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The chromatin structure over a core X element and the X associated repeats has been described previously [ 21].
For a given TR unit, the associated repeat type is defined as follows: All TRs with units that differ from the given repeat unit only by circular permutations and/or the reverse complement are associated to the same repeat type.
The exception was the non-coding subtelomeric regions, which had positive log2 ratios, indicating nucleosome enrichment and tight packaging of telomere associated repeat elements (TAREs).
An analysis of the chromatin structure over the core X and associated repeat elements at XIL showed no changes in the five deletion strains (Additional File 4).
H3K9me3 and PfHP1 binding is enriched throughout not just the var gene families but also the neighboring telomere associated repeat element (TARE) regions on all chromosomes [ 8].
The Perl script writes out the merit function value, associated repeat and basal genome sizes and scaling factor to a file and proceeds with the next combination.
The most striking feature of this analysis is that the DVNs that the CENP-A associated repeats have "chosen" for homogenisation/amplification are quite distinct from the other repeats.
He suspects that Mr. Perot, despite his associates' repeated denial of political involvement, continues to push the buttons of the party he created and is trying to rebuff Mr. Buchanan as a usurper.
Cystic fibrosis is a degenerative disease characterized by progressive epithelial secretory gland dysfunction associated with repeated respiratory infections.
Oral delivery can also help to eliminate the adverse effects and scar tissue buildup associated with repeated injections.
We termed the ERPs associated to repeated targets' Memory-Evoked Potentials (MEPs) to emphasize the fact that they parallel perceptual learning30.
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