Graphiti is used routinely with the following graph types and associated file formats: CAL networks [13, 25], a subset of IP-XACT [26], GraphML [27] and PREESM workflows [28].
Future developments that would expand the scope and power of this approach include tools to standardize data and associated metadata formats, and the creation of interactive user interfaces to allow real-time exploration of the effects of program inputs on calculated outputs.
A pre-built sequence index, and associated NCBI-format annotation file, of the reference C. elegans genome was downloaded from http://tophat.cbcb.umd.edu/igenomes.html.html
We introduce a format for sharing grid workload information, and tools associated with this format.
Some molecular descriptors that are associated with molecular formats are categorized as molecular format descriptors.
Pertinent metadata stored as 'tag=value' attributes in column 9 of the GFF file format associated with each displayed feature can be seen by mousing-over the feature.
Classification of CSHCN: After screening for CSHCN, the parents were asked to describe the main health problem (open answer format) associated with those special health care needs.
MI subscale: quality of medical information RS subscale: relationships with staff and daily routine The new response format associated with a 5-point scale yielded a very marked decrease in ceiling effect accompanied by a normalisation of the scores (Table 3).
We focus our studies on models in SBML and CellML formats, associated simulation setups in Simulation Experiment Description Markup Language (SED-ML) format and semantic annotations from bio-ontologies.
The HUPO-PSI formats mzML, TraML, mzIdentML, mzQuantML and GelML, as well as the PSI-associated format imzML and the non-XML mzTab [45] and MITAB [47] formats all make intensive use of controlled vocabulary terms defined in ontologies.
Compared to the format diversity associated with network visualization, the file format landscape around tree viewers is fairly uniform.
