In this study, we employed CGH using a custom-designed Affymetrix V. harveyi BAA-1116/HY01 DNA microarray to delineate 38 geographically, environmentally and temporally distributed members of the Harveyi clade and confirmed the resulting cluster assignments using two MLSAs.
However, molecular classification of 12 cancer types based on cluster-of-cluster assignments using five omics datasets – DNA copy-number variation, DNA methylation, mRNA expression, microRNA profiles, and phosphoprotein levels – has separated basal-like breast cancer and ovarian cancer as two distinct cancer types, with ovarian cancer matching to its own tissue origin.
With regards to correct species assignment using BLAST, two (trnH-psbA and matK) of the three barcode loci showed similar success in identification of LFDP and BCI taxa for both species and genera at 98 100% and 100%, respectively (Table 2).
The automatic assignments of bCSs were done using two different programs, the AutoAssign (Moseley et al. 2001) and the RASPnmr (MacRaild and Norton 2014).
To investigate whether a particular subset of covariates is a suitable proxy for genetic assignment, we used two distinct measures.
Four blocks of patient assignment were used; two blocks of 0 9 and two of 0 19.
Previously, the assignment of polymorphic SNP loci was conducted using two methods.
We further quantify design performance tradeoffs using two best-fit tube assignment algorithms on human SNP data.
Each comparison was further analysed using two replicated hybridizations with the dye assignments reversed, providing a second level of replication.
We optimize the circuit power using two major approaches, pipelining and dual-supply voltage (dual-Vdd) assignment.
I assessed my methods using two techniques: informal anonymous teaching evaluations and individual homework assignments.
