Sentence examples for assignment of tag from inspiring English sources
M[− i ] represents the assignments of tags to sites, except the assignment of tag i. (4) represents the conditional probability of assigning tag i to the j-th probable site of i, given the original data and the assignment of all tags except tag i.
This was the case, with a ten-fold greater assignment of tags to features in the sense orientation than antisense.
The assignment of tags to genes is facilitated Galaxy (Giardine et al., 2005), and a tutorial is provided in the user manual.
We use D to denote the original data, which essentially represent the associations of tags with possible sites, and M to denote the whole assignment of tags to sites.
The present results reveal that in more than 90% of the cases, the assignment of tags to Uniprot-linked accessions is congruent with the annotation of longer ESTs from other legumes.
In future studies, the implementation of specifically curated and annotated databases like KeyDNATools ([ 32] and ) will be beneficial for the taxonomic assignment of tags that have a good BLASTN match to environmental sequences but lack a species-match within a defined sequence similarity threshold.
LongSAGE generates longer tags of 21 bases as compared to the classical SAGE protocol and is therefore better suited for the unambiguous assignments of tag to genome sequences [ 3, 4].
A combination of BLAST against the GenBank database (http://www.ncbi.nlm.nih.gov/GeneBank) and RDPQuery [43] against the RDPII database [44] guided taxonomic assignments of tags.
The assignment of TMT tag (126 131) to each sample was randomized (www.random.org) to guard against bias.
We developed three automated analysis pipelines to analyze quality-checked 454 reads: The first pipeline for taxonomic assignment of V9 tags, the second pipeline for clustering V9 tags at different sequence similarity levels and dereplication, and the third pipeline to construct a global tag-matrix for sample comparison.
(5) So the normalized likelihood ratio represents the conditional probability for the j-th probable site given the assignment of other tags.
