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Even if HGT from Firmicutes is not considered, 42% of the genes were assigned as HGT from other bacterial taxa based on the gene-order method.
The bending mode at 402 cm−1 is also ascribed to chrome yellow, while the bands at 381 and 325 cm−1 are assigned as overlaps from both pigments [4, 21 23].
L 3 and L 2-edges located at approximately 710 and 721 eV have been assigned as transitions from Fe 2p to an unoccupied 3d orbital.
The analysis of Fig. 5 shows that Tango songs are also sad songs and correspond to 19%% of the songs which have been assigned as sad from the different genres.
Examination of the two MS/MS spectra assigned as peptides from Apc11 indicated an accurate match between the experimental and theoretical m/z values of parent ions to within a few parts-per-million.
Accordingly, these two cross-peaks were assigned as arising from conformational exchange.
They were assigned as arising from protonation of C and C at the N3 position.
Proteins were assigned as deriving from the blastocoel if they were identified by at least one proteotypic peptide and they were not detected in blank samples.
In the case of the proteobacteria, all F. nucleatum genes with trees fulfilling this criteria were assigned as HGTs from proteobacteria.
In ECAO, there are two such peripheral metal ions, originally assigned as calcium from crystallographic data (19) and subsequently confirmed by inductively coupled plasma mass spectroscopy (ICP-MS) (40).
To be assigned as originating from the archaeales, the F. nucleatum had to be closest to at least 3 species, and there had to be a clear association between the two groups, i.e. the branches were relatively short, and the tree topology did not resemble a "star phylogeny".
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