The phrase "assessment of assembly" is correct and usable in written English.
It can be used in contexts where you are evaluating or analyzing the process or outcome of an assembly, such as in manufacturing or group activities.
Example: "The assessment of assembly revealed several areas for improvement in the production line efficiency."
Alternatives: "evaluation of assembly" or "analysis of assembly".
As more purpose built de-novo transcript assemblers become available there is a need for a systematic assessment of assembly tools and sequencing protocols for Illumina metatranscriptome data.
Additional file 1: Assessment of assembly quality.
Secondly, our assessment of assembly quality found no evidence for selective amplification of unannotated sequences.
These datasets are not independent, but each offers a different assessment of assembly quality.
The map also aids in assembly of reference genomes, gap-filling, and independent assessment of assembly accuracy.
Finally, a stringent assessment of assembly performance was performed by calculating the number of CCDS represented in a TA which had a >=90% CRR.
Beyond using highly conserved plant and eukaryotic genes for quality assessment of assemblies, we successfully focused on FLcDNA recovery and resolution of closely related sequences characteristic of large gene families of conifer defence and secondary metabolism.
Although the ortholog hit ratio does not consider the effects of alternative splicing (unless alternative splice forms also exist in the reference dataset), it appears to be an excellent method for the comparative assessment of assemblies.
Meanwhile, the model for the assessment is provided by fuzzy synthetic evaluation (FSE) and the comprehensive assessment values of assembly partition schemes can be computed to judge the final optimization scheme.
Therefore while the CEGMA results might imply less than complete genome our assessment of the assembly using the cDNA data demonstrate that this assembly is a High-Quality Draft assembly of the A. candida gene-space as defined by Chain et al [ 47].
Assessment of genome assembly quality and rDNA analysis: The in silico evaluation of assemblies was performed using computing genome assembly likelihoods (CGAL) (version 0.9.6) and REAPR (version 1.0.16) tools, rDNA operon prediction was performed using RNAmmer software (version 2.3.2) and alignments were created using Geneious software (version 6.1.5) (Auckland, New Zealand).
