Sentence examples for assessed convergence of from inspiring English sources

We assessed convergence of the chains by evaluating trace plots, which are shown in Figures 5 and 6 and did not find any evidence suggesting the chains did not converge.

Calculating the ESS assessed convergence of the MCMC procedure.

We assessed convergence of chains using the Gelman and Heidelberg diagnostics using the gelman.diag and heidel.diag functions in R. We report posterior distributions of latent variables and parameters as 0.500 (median), and 0.025 and 0.975 quantiles (e.g. 95% credible intervals).

We assessed convergence of the Markov chain Monte Carlo method as well as sensitivity to priors to ensure robustness of estimates to priors (results not shown).

We assessed convergence of BAMM runs by computing ESS for the likelihood of the data and for the number of distinct regimes, obtaining more than 4000 independent samples from the posterior after a "burn-in" of 10%%.

Three replicate runs were done to assess convergence of results, producing the consensus topology shown in Figure 6.

(RAR 211 kb) Additional file 3: Assessing convergence of MCMC analyses.

Tracer (ver. 1.5) [ 36] was used to assess convergence of the MCMC chains.

Log files were examined in Tracer v.1.5 [ 41] to assess convergence of each run.

Multiple runs were performed for each K to assess convergence of the results.

The Gelman-Rubin model diagnostic tool (57) was used to assess convergence of chains before summarizing the results.