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This coverage value is more than twice as high as the highest reported value from a de novo transcriptome assembly to date [summarized in [ 20]].
Here, Perlmutter et al. have used state of the art computational methods and advances in graphical processing units (GPUs) to produce the most realistic model of capsid assembly to date.
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However, the presence of an assembly gap between the two blocks of repeats observed on chromosome 4 indicating this repeat is not fully resolved, as well as assembly gaps between the beta-defensin clusters on chromosome 8 would suggest the genome assemblies to date are rather tentative and preclude us from determining how much each block contributes to the variation in copy number.
The assembly conditions used to build NCBI UniGenes make it the most comprehensive coding DNA (cDNA) assembly available to date, and UniGene assemblies have been used as a reference set of sequences for many species.
Here, in order to achieve a high coverage of the gene content of the migratory locust, we carried out the first de novo transcriptome with the aim of developing a comprehensive core gene set of an organism having a huge genome size, and also the largest de novo transcriptome (447 million reads, 21.5 Gb), with the best assembly results to date (72,977 sequences having a mean length of 1,170).
K-mer sizes higher than 41 produced a reduced number of full length assembled transcripts irrespective of coverage cutoffs, a result consistent with most transcriptome assemblies reported to date which typically report optimal k-mer sizes smaller than 41.
However, the limited stability of Au thiol self-assembly chemistry to date limits its application to impedance biosensors.
The wide distribution of the PLTS among prokaryotes is a unique characteristic compared with the needle-like assemblies known to date and raises central questions related to the biology of this machinery, to its host/target range, and to the ecological implications of its introduction as a bacterial fitness determinant in mixed prokaryotic communities.
These data provide the most complete description of RVFV assembly and release to date, and suggest novel targets of the development of anti-phlebovirus drugs.
Concerning the mechanism of assembly, the mechanisms proposed to date, involve either the association of folded or almost fully folded monomers (induced-fit, lock and key and conformational selection) or the association of unstructured monomers (fly-casting) [26], [27], [28], [29].
However, no efforts have been made to improve detection and imaging of cancer tissue by translating these findings into the assembly of nanosized polymersomes to date.
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