The phrase "assembly of pipelines" is correct and usable in written English.
It can be used in contexts related to engineering, construction, or data processing where multiple pipelines are being brought together or organized.
Example: "The assembly of pipelines was completed ahead of schedule, allowing the project to move forward without delays."
Alternatives: "collection of pipelines" or "network of pipelines".
The TJSON format is used for catalogs and as input/output for most of the toolkit functions facilitating the assembly of complex pipelines.
Projects such as dnGASP (de novo Genome Assembly Project; [ 26]), GAGE Genome Assembly Gold-standardd Evaluations; [ 27]), and the Assemblathon [ 28] have all sought to evaluate the performance of a range of assembly pipelines, using standardized data sets.
The assembly of SPMC and pipelines is 3D axisymmetric and in order to make solution more efficient the sealing can be idealized as a 2D problem.
Such a review would be tremendously helpful for researchers planning a NGS project since it would provide a rich resource to guide the assembly of an analytical pipeline for a particular application or alternatively select a fully integrated pipeline.
For assembly of ESTs, a pipeline using blast and the CAP3 assembler was used, by first blasting all sequences using blastn with a word size of 36 and feeding the results as a fasta file to the CAP3 assembler[ 76].
PHRAP has been widely adopted as an integral component of assembly pipelines such as implemented by Havlak et al. [ 28] in the Atlas Genome Assembly System and Mullikin and Ning [ 29] in the Phusion Assembler.
Applying succinct data structures allowed to decrease the memory usage by an order of magnitude, and a whole assembly pipeline of a human individual was run in about 36 GB of RAM [ 56].
In addition to built-in tools for visualization, colocalization analysis, segmentation, and tracking, the graphical user interface of BioImageXD facilitates the assembly of custom image analysis pipelines.
In this pipeline, assembly of microreads into contigs is performed by YASRA [ 68], which assembles contiguous sequences (contigs) by iteratively aligning sequence reads to a reference genome using the lastz alignment algorithm [ 69].
Several pipelines for the assembly of transcriptomes have been suggested in a number of studies.
The first protocols for assembly of hybrid data applied a multiple-assembler pipeline.
