Sentence examples for assembly of benchmark from inspiring English sources

Nevertheless, any available data on the median effective dose could be embedded within the existing data field for assay comments, so as to facilitate future assembly of benchmark datasets from such maximally informative data.

To compare the assemblies, a set of benchmark contigs were created that contained 30,853 mate-pairs (61,706 ESTs) which aligned to 5437 of the KOME rice FL-cDNAs [ 35] (see Additional file 3: Benchmark contigs).

A two-step evaluation was applied on all resultant Trinity and Oases assemblies to benchmark their quality.

In the single-end experiments, we used Escherichia coli and Bacillus cereus datasets of MiSeq, Velvet assembler for genome assembly, and GAGE benchmark tools for result evaluation.

The quality of the assembly was benchmarked against the core set of eukaryotic genes using the Core Eukaryotic Genes Mapping Approach CEGMAalgorithmthm (E value cutoff ≤1e-5) [ 55].

The quality of the assembly was benchmarked against the core set of eukaryotic genes using the Core Eukaryotic Genes Mapping Approach (CEGMA) algorithm [ 41].

"If that's any kind of benchmark".

The price of benchmark bonds also fell.

In the present study, eight short reads assemblers, representing four various assembly strategies, were benchmarked against two types of simulated short reads datasets derived from four different genomes.

In total, 5,777 transcripts are annotated in PlasmoDBv10.0 *RABT = Reference annotation based transcript assembly To further benchmark Cufflinks assembly performance in P. falciparum, we compared the expression properties, GC content, and length of Cufflinks-assembled transcripts to those of previous annotations.

Next, we used the T. castaneum set of Benchmarking sets of Universal Single-Copy Orthologs (BUSCOs; 2,787 genes) to further assess the assembly completeness (Waterhouse et al. 2013).