The phrase "assembly listing" is correct and usable in written English.
It is typically used in the context of programming or computer science to refer to a detailed output of the assembly language code generated by a compiler or assembler.
Example: "The developer reviewed the assembly listing to identify optimization opportunities in the code."
Alternatives: "assembly code output" or "assembly language output".
We accessed all relevant opsin sequences from the genome assemblies listed above via BLAT.
First, these six genes also are missing in the other assemblies listed in Table 1.
London Vote share recovers enough for party to hold both its assembly list seats.
Now, the 43-year old is running for mayor, and is first on the Liberal Democrat's assembly list.
The resulting assembly lists the contigs in a rough ordering along the clone contigs, but does not strictly order or orient them in scaffolds.
Interrogation of version 4 of the cattle genome assembly (UCSC Genome Bioinformatics – ) shows that a similar local rearrangement of C4 and CYP21 loci exists in cattle, although the assembly lists three C4 loci whereas only two such loci were detected in sheep.
a The genomic regions which were not assembled in 454/Draft assembly are listed above; b the 'x' coverage defines the raw-read coverage averaged over given coordinates; c 'Complete/partial' contig coverage defines whether the region was completely/partially assembled while 'None' defines that this region is missing in the respective assembly.
The reasons behind the use of de novo approach for the transcriptome assembly are listed below; The genome and transcriptome assembly were run in parallel, thus, it was not possible to make use of genome assembly for constructing the transcriptome.
Some general quality indexes of this assembly are listed here: coverage of the genome after mapping and assembly (63.2%), number of scaffolds (1,612,870), and N50 scaffold length (2092 bp).
The quantities of scaffolds in each assembly are listed in Table 2. Resulting scaffolds in each genotype transcriptome assembly were separately used for Basic Local Alignment Search Tool BLASTT) searches and annotation against nucleotide (NT), non-redundant (NR), Swiss-Prot and Cluster of Orthologous Groups of proteins (COG) databases using BLAST software (22).
