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The ZV3 assembly contained only one copy of zonadhesin that also assembles into linkage group 7.
The final assembly contained 65% of all the reads that were assembled into 5,625 large contigs.
The final transcript assembly contained 50,313 contigs, with a total of 36,479,993 nucleotides.
The mammary transcriptome assembly contained a high number of contigs (nearly 225,000).
The UCD10X assembly contained the smallest number of contigs (134,573), with the next most contiguous genome having 32% more contigs (CM334 v1.55––177,870).
The reference assembly contained five full-length amy1 subfamily genes, four of which, here designated as amy1_1a d, shared >99.8% identity at the nucleotide level including introns.
The final draft assembly contained 65 contigs in 65 scaffolds, totaling 9.064 Mbp in size.
The initial draft assembly contained 25contigs in 25scaffolds.
The initial assembly contained 19 contigs in 1 scaffold.
The bottom chamber of the insert assembly contained appropriate medium (with no cells).
Each assembly contained four sequences: 5'- and 3'-end sequences from both JGI sequencing data and our re-sequencing effort.
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CEO of Professional Science Editing for Scientists @ prosciediting.com