The phrase "assembly comparison" is correct and usable in written English.
It can be used in contexts related to evaluating or analyzing different assemblies, such as in manufacturing, engineering, or programming.
Example: "The assembly comparison revealed significant differences in efficiency between the two production lines."
Alternatives: "component evaluation" or "assembly analysis".
They used two independent approaches to detect segmental duplications: WGAC (whole-genome assembly comparison), which is a BLAST-based analysis of all assembled sequence that detects self alignments (>90% and 1 kb); and WSSD (whole-genome shotgun sequence detection), which is an assembly-independent approach that examines the reference sequence for an increase in WGS read depth-of-coverage.
(B) Ring assembly comparison.
Table 6 shows the assembly comparison using mate-pair information on the read set for the E. coli genome.
For the 3,795 assembly comparison in rice, 2,717 (71.6%) will lead to a frameshift, and for Arabidopsis, 1,002 of the total 1,635 (61.3%) assembly comparison will lead to a frameshift in translation.
The most straightforward way to do this is the whole-genome assembly comparison (WGAC) approach (Bailey et al. 2001).
Human segmental duplication content of inversion breakpoints was determined using the whole genome assembly comparison approach (44).
At the highest level of assembly, comparisons of pORF clusters reveal that 9% and 7.5% of the mRNAs are shared with the relevant metagenome.
All assembly comparisons were made with the help of Sequencher v4.5.
For the 3,174 assembly comparisons in the Arabidopsis AA class, 1,491 (47.0%) retain their translational frame and the remaining 1,683 will be frameshifted.
The y-axis indicates the number of pairwise assembly comparisons that identify these splicing variations as binned by their respective ratios of underlying transcript support.
An event is defined here as the unique feature (e.g. donor site, acceptor site, a series of skipped exon(s), etc) isolated from the assembly comparisons.
