Sentence examples for assembly assessment from inspiring English sources

Computational tools to aid the design of compatible DNA shapes and the structure assembly assessment are presented.

The optimal assembly was selected based on the typical assembly assessment metrics, including N50 [the N50 is defined as the shortest sequence length at 50% of the contigs or genome (Earl et al. 2011)], total size, the largest contigs length and the number of contigs.

The map can not only provide the start point for the clone-by-clone genome sequencing approach and assembly assessment, but also be used to validate and improve the contig layout of existing whole-genome shotgun sequence assemblies [1], [2], [4].

The contigs harboring two or more BAC-anchored microsatellite markers were collected for assembly assessment.

We recommend using the multi-fasta file for assembly assessment and variation discovery, since this reflects the most accurate outcome of the assembly process.

The approach and assembly assessment with CVG demonstrated here would be applicable to transcriptome analysis of other species as well as whole genome analyses.

Post-assembly assessment showed that 99.16 % of the MiSeq reads mapped to the assembly and 98.87 % were marked as properly paired.

The narrator is demoted to the basement to "assist in the assembly and assessment" of ascertainment files.

Full details on the sequencing, assembly, quality assessment and expression analysis can be found in Ness et al. [ 47].

In absence of a whole genome assembly, the assessment of the exact pattern of the SNP distribution in the catfish genome is not possible.

We used EST sequences generated from a cDNA library derived from males of another D. albomicans strain (strain 15112-1751.4) [ 9] for assembly quality assessment.