Sentence examples for assembling sequence from inspiring English sources

As the size and coverage of the human genome assembly increased, the focus turned from accumulating and assembling sequence to identifying and mapping functional landmarks, such as known genetic markers, genes, points of regulation and cytological features such as centromeres and telomeres.

Due to the nature of the algorithms used for assembling sequence reads into contigs and scaffolds, the Gy14 assembly used in our analysis most likely corresponds to the single/low copy fraction of the genome (the left-aside unassembled sequence reads, presumably, represent most of the repetitive fraction).

And Phil Green, a genomicist at the University of Washington, Seattle, who has developed the widely used PHRED and PHRAP programs for assembling sequence data, said that he, too, had come up with a low gene count of about 35,000.

By assembling sequence information for a single gene region from all species, in contrast to the usual focus of large scale genomics projects which acquire sequence information for all genes in single taxa, DNA barcodes can provide a quick preview of recent evolutionary history [28].

Such an objective will require application of high throughput sequencing technologies allied to advanced bioinformatic tools for assembling sequence data from very closely related genes.

The main challenge of assembling sequence data from an RNA virus sample into a consensus sequence lies in the extremely variable read depth from current sequencing approaches combined with the extensive viral population diversity.

Transcriptomic assemblies confirmed our assembled sequence of the B. tryoni transcribed unit (DCAS, unpublished data).

The assembled sequence was annotated through IonGap Annotation Service (http://iongap.hpc.iter.es/), an integrated Genome Analysis Platform for Ion Torrent sequence data.

Once fully assembled, sequence data were downloaded from BOLD for further analyses.

This is an unfortunate consequence of the inherent difficulty in distinguishing novelties from spuriously assembled sequence.

By searching the assembled sequence data for perfect microsatellite repeats we found 10 polymorphic loci.