Sentence examples for assembling a reference from inspiring English sources

Here we extend these resources by assembling a reference transcriptome using high depth Illumina sequencing.

The purpose of this study was to explore the content and organization of a conifer genome and assess the feasibility of sequencing and assembling a reference pine genome.

In such a case, a leaf in the tree would represent more than one haplotype, although the multiplicity of each haplotype was retained for the purpose of assembling a reference panel.

Our strategy of assembling a reference genome from short next-generation sequences of a randomly sheared RRL of pooled genomes, followed by subsequent SNP detection by aligning the same short reads against this reference genome, is a cost-effective and efficient method for the high rate discovery of SNPs in species with unsequenced genomes.

DNA barcoding in the current global sense refers to an international programme to assemble a reference library for biological diversity based on a single target sequence for animals, the cytochrome c oxidaze subunit 1. eDNA refers to trace material left behind in the environment, e.g. from hairs shed or cells left in faeces.

To gain insight into molecular mechanisms underlying the guppy's sexual dimorphism, we assembled a reference transcriptome combining genome-independent as well as genome-guided assemblies and analyzed sex-biased gene expression between different tissues of adult male and female guppies.

We constructed and sequenced an mRNA library of the High Five cell line, assembled a reference transcriptome for function and expression studies.

Already these results can be used to assemble a reference map of the brain.

We first combined the reads from all libraries to assemble a reference transcriptome for annotation purposes.

We used Newbler v2.3 (Roche GS De Novo Assembler) to assemble a reference transcriptome from 454 and Sanger sequences.

In this study we assembled a reference transcriptome from representative natural populations of F. grandis collected from Gulf Coast estuaries ranging from Texas to Florida.