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This database greatly reduces the burden of time, expertise and error involved in assembling a compendium of curated gene expression data from tumours of known histopathology and from patients with known clinical progression.
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If you wanted to assemble a compendium of street photography clichés, you could simplify the task by picking from "Hipsters, Hustlers and Handball Players: Leon Levinstein's New York Photographs, 1950-80" athehe Metropolitan Museum of Art.
Speaking at the Australia-US Ministerial Consultations, or Ausmin, meeting, John Kerry said the US and Australia would work "to assemble a compendium of the best practices in the world together regarding those foreign fighters".
The Brothers Grimm, who compiled a massive dictionary known as The Grimm, also assembled a compendium of folk tales and fables, which highlighted the story-telling parallels between different regions.
To obtain a global overview of stem cell expression patterns, we assembled a compendium of data from 30 different studies assaying gene expression of 49 stem cell populations representing twelve different types of stem cells including hematopoietic, retinal, neural, embryonic, and intestinal (Figure 1; Table 1).
We first assembled a compendium of epistatic interactions that included all published S.cerevisiae E-MAP interactions [ 9, 25- 27].
We assembled a compendium of microarray data from 12 studies that measured host transcription in mouse lungs following infection with respiratory viruses (Table 1).
The European managers of the DNA Methylation Database have assembled a compendium of known DNA methylations that, although not comprehensive, still provides a useful tool for researchers investigating the roughly 22,000 human genes.
Recently, we assembled a compendium of inborn errors of metabolism, which accounts for 250 human genes and 235 hereditary human diseases, many of which have known mouse models (http://www.omim.org/).org/
To approach this question we assembled a compendium of host transcriptional responses to low-, medium-, and high-pathogenic infections (which we designate as LPIs, MPIs, and HPIs, respectively) and applied a battery of meta-analysis techniques.
To this end we assembled a compendium of transcriptome measurements from the lungs of mice and used meta-analysis to determine gene signatures that distinguished high- from low-pathogenicity infections.
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