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While these comparisons between assemblers (or assemblies) use common quality metrics, it is unclear how accurate the metrics themselves are.
Many armored fish scale assemblies use geometric heterogeneity of subunits as a design parameter to provide tailored biomechanical flexibility while maintaining protection from external penetrative threats.
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We first run assemblies using the three assemblers with their default parameters, and similar assembly results were obtained in assemblies using Mira and Cap3.
Sequences from PCR products were assembled into the shotgun assemblies using CodonCode Aligner-v3.7.1 (CodonCodeCorp., USA).
Tower makes structural components and assemblies used by automotive equipment manufacturers.
Both assemblies used similar Sulston scores.
Chimeric reads were detected and excluded from the assemblies using local Perl scripts.
In addition, mapping assemblies using the published KIM 10+ (accession no.
Baseline assemblies used for scaffolding.
Reads were used to generate assemblies using Velvet (version 1.2.10) [ 8].
We also performed paired-ended assemblies using ABYSS on datasets generated with mate-pairs information.
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