Sentence examples for assembler module from inspiring English sources

We used a Newbler (gsAssembler module v2.5.3) assembly of sequences from random genomic sequencing (0.15× of coverage) from P. glauca[ 29] to identify highly repetitive elements and to filter out probes representing such elements as they were expected to reduce the efficiency of the sequence capture.

Sequences were assembled de novo into contigs using the GS De novo Assembler module of Newbler version 2.3 (Roche) [ 49].

The assembler module and the loader module are controlled by a monitor and controller module.

After being collected by the extractors, the data is processed by an assembler module, to fit the target's data structure.

The data is inserted into the database by a loader module, which gets data from the assembler module.

Sequencing was performed by AGOWA GmbH (Berlin, Germany) and sequence analysis was carried out using the assembler module of the Kodon software (Version 3.6 Applied Maths, Sint Martens-Latem, Belgium).

Like other assemblers, the input for the assembly module is a set of reads from metagenomes.

CABOG used Celera Assembler's consensus module without any modification specific to pyrosequencing reads.

Our approach to hybrid data assembly reuses the Celera Assembler scaffold and consensus modules.

These data were assembled using the Celera Assembler (http://sourceforge.net/projects/wgs-assembler/) version 6.1 using the CABOG module, an overlap-layout-consensus sequence assembler that has been recently optimized for use with 454 Titanium paired-end sequence data.

Then the mapping file was processed by a transcriptome assembler "Inchworms", which is now a module of transcriptome assembler "Trinity" [ 53], to de-novo assemble into transcript contigs.