Sentence examples for assembler it from inspiring English sources

Despite the apparent pre-eminence of the SGA assembler it should still be noted that this assembly only ranked 1st in one of the ten key metrics that was used and ranked 7th in another (the amount of gene-sized scaffolds).

Even though it introduces more relocation errors in S. Typhi (errors caused by gap/overlap size estimates over/under 1kbp), compared to SPAdes (St . Petersburggenome assembler), it never introduces inversions (Table  2).

Despite the availability of multiple sequencing technologies and tools (e.g., assemblers) it is still difficult to assemble new genomes at chromosome resolution (i.e., one sequence per chromosome).

Among plant and machine operators and assemblers, it was 66%.

The need for a short-read aligner arises because, for Eulerian path based assemblers, it is difficult to determine the actual read composition of the contigs.

Rather than using a single assembler for the hybrid assembly, it is crucial to develop a suitable strategy by using several assemblers for the assembly of combination of different types of sequencing reads.

Each of the read sets {Ai}, {Ij,k}, and {Dj,k} are then assembled using Euler, which is perhaps the most accurate assembler because it will not merge overlaps for which there is ambiguity.

They started with Assembler and, "it was like a foreign language to me.

We elected to use the CLC de novo assembler as it has performed well in a number of previous Illumina-based transcriptome assemblies [ 25, 26] and is the assembler of choice in [ 22].

MIRA is our preferred assembler as it is an open source tool which is considered reliable for data from different NGS platforms [ 8] and it has been very well tested in other parasitic helminth transcriptomic studies [ 12, 18].

The program WgsMitoAssembler is a guided assembler, and it requires a reference mitochondrial sequence which is used to choose a beginning read and an ending read from the entire WGS dataset.