Sentence examples for assembled with the Program from inspiring English sources

The resulting short reads were loaded into gsAssembler v. 2.6 (Roche 454 Inc., Branford, CT) and assembled with the program's cDNA assembler, using the parameters of a minimum overlap of 60 nt (nucleotide), and minimum shared identity of 97%.

The sequence was assembled with the program Phrap (www.phrap.org) and finished as described previously [27].

The sequence was assembled with the program Arachne [ 42] and finished as described previously [ 43].

ESTs were assembled with the Program for Assembling and Viewing of ESTs, PAVE [ 86].

All sequencing reads were assembled with the program Seqman in the DNASTAR package (Burland 2000).

The Roche 454 reads of the tammar were extracted and de novo assembled with the program CAP3 [ 54].

The extracted reads were initially assembled with the Newbler program (GS Reference Mapper) of the 454 Sequencing System Software 2.5 from command line with standard parameters.

Sequences were assembled with the MultAlin program available on the web page: http://bioinfo.genotoul.fr/multalin/multalin.html.html

Sequences were assembled with the SeqScape program v.2.5.

Clean reads were then assembled with the Trinity program [ 32].

The sequences were assembled with the CAP3 program [ 20] and annotated with BLAST [ 21].