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Adherence history is given by 4 time-dependent indicators with "optimal" adherence as a reference class.
Since the group of SY was defined as a reference class, two MLR models were obtained for the TE and SE groups.
Accordingly, we measured the average codon usage for all genes in the genome (B(F|C)) as a reference class of an average gene, and the average codon usage of ribosomal proteins (B(F|RP)) as a standard class of highly expressed genes.
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To allow a quick visual identification of the differentially expressed genes, we built a series of volcano plots combining, for each gene, the statistical significance with the magnitude of its change compared to a reference class (expressed as fold change).
a: reference class.
The results of latent class regression are presented in Table 8. Second class was considered as a reference category.
Here, the third class was considered as a reference category; therefore the investigation of covariate coefficients show that university educational attainment, positive family and personal history, and contributing in educational screening and preventing program have positive impacts for being an individual in higher levels of awareness (OR > 1, P < 0.05).
For the unpolarized MK data, the estimate of the proportion of amino acid substitutions fixed by positive selection is calculated using synonymous mutations as a neutral reference class, following Fay et al. (2002) and excluding singletons.
Write notes on the board for students to use as a reference during class.
We also estimated the proportion of substitutions attributable to positive selection using SI8 30 sites as a putatively neutral reference class (hereafter, α*), instead of synonymous sites, for the unpolarized data (table 3).
Should we then take the prison population as the reference class?
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