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Extension here is used as a functional label representing combinations of semantic choices in the system of PHASE.
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A protein without a specific functional label might merely be due to lack of evidence experiment.
Each neighbor votes for their own annotations, and the majority is used as the predicted functional label.
Then we consider the unique combinations of keywords as the protein functional labels (FL), which characterize the biological functions of the given protein and construct the contingency tables and graphs providing the projections of transcription units (TU) and alternative splice-variants (SV) onto all FL of the proteome of a given organism.
Each potential functional label of a node at index j of P, appears as a contextual-label vertex in the j-th column of the corresponding context-label network.
The functional label is a set of keyword IDs assigned to a particular protein.
These methods constructed a composite network for each functional label.
In order to exclude that synapse clusters of vesicle rich synapses are a phenomenon of styryl-dye labelling we tested sets of experiments in which we had used an antibody based functional labelling system as well as overexpression experiments for their compatibility with the results from FM-dye labelling.
GeneMANIA uses label propagation on an integrated network specifically constructed for each functional label, and is currently available as the state-of-the-art web interface for gene function prediction in multiple organisms.
Texturisers, just like modified starches, are based on highly processed, altered starch designed to withstand high-pressure manufacturing – but because they are obligingly classified by food regulators as a "functional native starch", they can be labelled simply as "starch".
To assist rapid application development, the symbolic equation systems can be exported as MathML documents (e.g. for computer algebra systems) and as MATLAB™-based fully functional labeling simulator.
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