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We use a tight-binding model to investigate the transmissivity, Lyapunov coefficient and localization length of DNA, including periodic poly(G poly(C), quasiperiodic Fibonacci polyGC and random sequences, as a function of sequence length and temperature.
Table 3 Comparison of code lengths as a function of sequence length.
Figure 5 is plot of the number of decoys at various cut-off values as a function of sequence length.
But even so, calculating the energy of all mathematically possible interactions would introduce an exponential number of states as a function of sequence length.
Our aim in the present study was to examine discrimination between tempi of isochronous sound sequences comprising empty time intervals delimited by clicks as a function of sequence length.
RNAsnp makes use of the efficient scanning variants of RNA folding algorithms provided by the Vienna RNA Package and uses precomputed tables describing the score distributions as a function of sequence length, G+C content, and SNP position, and distance or correlation measure.
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As the information that DNA composition-based methods rely on is a function of sequence lengths, most of these methods deteriorate below 3 5 kb and perform poorly on sequences shorter than 1 kb.
The former is a linear function of sequence length, and the latter is an exponential function of sequence length.
Note that the running time of GDDA-BLAST linearly increases as a function of query sequence length.
Figure 1 shows the switch error rate of SDhaP as a function of sequencing coverage for various block lengths and error rates.
Mappability does not change as a function of sequencing technology, but only as a function of read length and the genome the reads are mapped against; And non-hydrolysis and contamination with pre-mRNA are independent of platform as well since they precede the step of deep-sequencing.
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