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A sub-panel of 2 m2 was cut from the arrays for subsequent selection and removal of individual solar cells for analysis.
Thus, in our laboratory, all cDNA arrays are imaged for quality control prior to hybridization, maximizing the use of quality arrays for subsequent experimental procedures.
Potential outlier arrays were removed by visual inspection of raw perfect match data and iteratively discarding arrays that failed the quality control test (where expression values deviated significantly from the relative log expression and the normalised unscaled standard error) leaving 463 (Nimblegen) and 403 (Affymetrix) arrays for subsequent analysis (see Additional file 2).
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These reads are collected in an array for subsequent assembly, thereby limiting the sequence space of the assembly to that of the target region.
SSH results are therefore often used for the generation of macro-arrays for subsequent analysis of gene expression [ 5].
After hydrolysis, MALDI matrix is deposited onto the array for subsequent MALDI MS analysis.
Following each recording, the suction was released but the arrays were held in place to ensure no change in array placement for subsequent recordings with different modes.
Based on these quality checks, all arrays were retained for subsequent analysis.
Therefore, a final dataset of 196 arrays was used for subsequent analyses.
Only genes showing at least a 4-fold change from that gene's median value on 20% or more of the arrays were considered for subsequent analysis.
Selective array probes allow for subsequent detection and genotyping of generated amplicons by hybridization.
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