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The MIMO configuration used for the simulation is characterized by a 2 × 2 antenna array setting with 20 MHz bandwidth, which is one of the long-term evolution configurations[29].
To account for nonspecific hybridization among marginally related sequences, we subtracted 3× the median value of the 1,236 negative controls from each probe on that array, setting any resulting negative values to zero.
Whether single spot or pattern array setting was used was decided independently of clinical findings.
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We performed genotyping and methylation experiments using the Affymetrix Mapping 500K array set (Nsp I array and Sty I array).
A total of 418 subjects (controls) were genotyped using both the Affymetrix GeneChip Mapping 500 K Array Set and the Illumina HumanHap 550 K Array set and passed all cleaning procedures.
The array set tiles 15,911 regions encompassing the promoters of 22,833 primary transcripts (approximately 4,500 bp upstream and 1,125 bp downstream from transcription start site).
The immunoprecipated DNA was hybridized to the Affymetrix Human Tiling 2.0R array set, interrogating the non-repetitive sequences of the entire human genome.
Fifth, the highly scalable approaches used to microfabricate the array set the stage for the development of next-generation parallel devices with more than 1,000 wells.
The WTCCC study used the Affymetrix GeneChip 500K Array set to conduct a GWA study made up of two European cohorts for each disease.
FHS subjects were genotyped using Affymetrix GeneCHip Human Mapping 500 K array set (Affymetrix, Santa Clara, CA, USA) and/or the 100 K array set and/or the 50 K array.
The GeneChip Arabidopsis tiling array set (1.0F Array and 1.0R Array; Affymetrix, Santa Clara, CA) was used (Zhang et al. 2006).
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