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As a consequence, it was generated an extensive and vast array of genetic diversity that in principle can be predominantly structured in two main subgroups (Childs 2004), including the indica and japonica varietal groups.
Furthermore, association mapping studies benefit from the broader array of genetic diversity represented compared to linkage mapping studies [ 3, 4].
Conclusions: Positional cloning approaches are appropriate for maize mutants and quantitative traits, opening up to molecular characterization the large array of genetic diversity in this agronomically important species.
Our provenance trial study involves a much greater array of genetic diversity than would be expected from a single natural population, a feature shared with the studies of genetically diverse hybrid populations (e.g., Dungey et al. 2000) that often show strong plant genotype effects on associated herbivores (Tack et al. 2010).
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These newest arrays, including the Axiom Biobank and the UK Biobank genotyping arrays enable more comprehensive capture of genetic diversity across populations [ 28].
Comparatively few genomic sequences are publicly available (6 individuals total) from the KhoeSan, and ascertainment bias on many of the standard SNP arrays may strongly skew estimates of genetic diversity in these populations.
The main purpose of this study was an assessment of the applicability of the Atlantic salmon custom design Illumina iSelect SNP (Single Nucleotide Polymorphisms) array containing 15,225 markers for identification of genetic diversity between sea trout populations.
These considerations make the grapevine an ideal candidate for assessing the utility of next-generation sequencing and genotyping arrays in characterizing genome-wide patterns of genetic diversity of a high-diversity, domesticated plant species in order to move rapidly towards GWA studies.
Most recently, diversity arrays technology was used for the assessment of genetic diversity within Musa spp. (Risterucci et al. 2009).
The main objective of this study was to investigate the level of genetic diversity obtained by the novel custom Vitis18kSNP array, in order to analyse 71 grapevine accessions representative of wild and cultivated Georgian germplasms.
To assess the extent of genetic diversity that can be inferred among human subpopulations by the different arrays, we next compared their FST distributions (Wright 1951).
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