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Thus, while there was a homoeologous position for the alternating array in L. major, there was no trace of tubulin, or the adjacent histone gene array found in T. brucei.
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These findings indicate that most tandem arrays found in C. glabrata originated specifically in this lineage.
ChrUn - number of arrays found in ChrUn; HOR - presence of HOR.
HOR - presence of HOR; ChrUn - arrays found in ChrUn; WGS Chr - chromosome source from WGS contig description.
This indicates that curvature may not affect performance unduly, with functioning arrays found in linear, concave, and convex conformations.
Arrays - the number of TR arrays found in WGS; % of TR - percent of all TR found in WGS; Subfamilies - number of subfamilies in family.
Figure 4A shows the RU arrays found in the six human SVA subfamilies along a network generated using the SVA SINE-R part [ 5].
The DNA sequences of all integron gene cassette arrays found in completely sequenced vibrio genomes (along with the ORFs they encode) were retrieved from the KEGG database [ 26].
These traits, strain-specific small CRISPR-arrays found in few strains, suggest that the type III-A system has been recently acquired and/or accumulates few spacers.
Very few MaSat arrays found in the WGS exceed 10 kb, with the longest being ~23 kb (Additional file 2, NN 234 and 316).
Palindromes, inverted repeats, and tandem arrays found in the ampliconic regions could explain why the rate of gene conversion is so high, and this in turn would explain why they have been retained.
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