Sentence examples for array as implemented from inspiring English sources

Interval Mapping (IM) and Composite Interval Mapping (CIM) were performed on each cross for all of the 32,300 non-technical and non-repetitive probes on the CATMA array, as implemented in the R/eqtl package.

Subsequently, array Lowess normalization was applied to all arrays as implemented by Acuity 4.0 software (Molecular Devices, USA).

To summarize the probe sets from the Affymetrix gene expression arrays, we used the robust multi-array average method as implemented in the Affymetrix Power Tools.

The hybridization intensity values from the individual arrays were used to calculate RNA expression levels by correcting for background variation, normalizing across individual arrays and summarizing the individual probe pair data using robust multi-array average (RMA) as implemented in Bioconductor [18].

Expression values were normalized and probeset-level values calculated with robust multi-array average (RMA) as implemented in the R/Bioconductor package, affy (R version 2.8).

We also used the GC-RM A(GC Robust Multi-Array Analysis) algorithm, as implemented in the microarray analysis software package GeneSpring GX 7.3.1 (Agilent).

Lines Gh13 and a begomovirus-susceptible inbred, HUJ-VF that lacked the Ty-3 locus, were genotyped using a tomato array with 7,720 SNPs as implemented in the Infinium assay (Illumina Inc., San Diego, CA, USA).

Affymetrix raw data files (cell intensity [CEL] files) were first analyzed with robust multi-array Average (RMA) normalization as implemented in the Affymetrix Expression Console Software (version 1.1) to remove between-array effects and to standardize the low-level data [ 62].

Signal intensities for Affymetrix probe sets were calculated and normalized using the Robust Multi-Array Average (RMA) procedure as implemented in the Bioconductor package affy [108].

Probe set signal normalization and summarization was carried out using the Robust Multi-array normalization algorithm (RMA), as implemented in GeneSpring software.

Normalization of the expression values for the udder samples was performed using the Robust Multi-array Average (RMA) algorithm as implemented in the Affy package (version 1.24.2).