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Avascular, neovascularised, and normally vascularised retinal areas were quantified using Image J software.
CD31 positive areas were quantified using ImageJ software and all data was expressed as means ± SD of duplicate plugs normalized to the positive control (100% vascularization).
Images were processed using Adobe PhotoShop 5.0 or 7.0 and colony areas were quantified using the Image Pro Plus 5 software.
Totally, 10 random areas were quantified using an imaging analyzing system (CUE-2, Olympus Opticals, Hamburg, Germany), and the numbers were normalized to retinal capillary area.
VEGF-stained images were taken at the lesion epicenter in axial sections at ×50, and the VEGF-positive areas were quantified using light intensity gain counting (n = 3, each).
Visceral fat areas were quantified using non-contrast CT scans (conditions: 120 kVp, 150 mA, 3 mm slice thickness, 3 mm reconstruction interval) using a Somatom Sensation 16 (Siemens, Munich, Germany).
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The percentage of myelin loss within white matter areas was quantified using Aperio Software.
Interstitial area and fiber area were quantified using ImagePro Plus software (Media Cybernetics).
The number of colonies/plate and colony size, expressed as average area, were quantified using RT-Image software [28].
Lesion volume, spared tissue volume, and glial scar area were quantified using GFAP staining and the Cavalieri probe at 4× in all three groups using parasagittal sections, vehicle (n = 5), hFbs (n = 5), and hCNS-SCns (n = 6).
The stained sections were scanned (2.400 dpi), the digitized images of each brain section and the infarct area were quantified using a computerized image analysis program (Image J, USA).
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