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To distinguish splice sites that are present in a majority of transcripts from those that are present only in a subset of transcripts, we considered, for each splice site, the splice site to which it is most frequently joined, and extracted all spliced reads that overlap the corresponding intron (i.e., the most frequently spliced intron).
By definition, alternative nucleotides are present in a fraction of the transcripts of the respective genes, whereas constitutive nucleotides are present in all of the genes transcripts.
Individual transcripts within the Lucidea RNA mix are present in a range of concentrations.
True positive transcripts are present in the estimated transcript set and can be matched to an expressed transcript.
False positive transcripts are present in the estimated transcript set and cannot be matched to an expressed transcript.
False negative transcripts are present in expressed transcripts that cannot be matched with a transcript from the estimated transcript set.
Ly6g5b intron retention and Csnk2b-Ly6g5b chimera transcripts are present in many tissues of different mammals.
KoRV transcripts are present in the transcriptomes of both individuals studied.
Most of the letters are presented in both transcript and facsimile, giving the entries the textured quality of archival shadowboxes, arranged for quiet consideration.
Slo1 transcripts are present in human spermatozoa.
Antisense transcripts are present in the cDNA collections.
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