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Residues that are not seen in the PDB structure, even if they are part of the sequence expressed by the crystallographer, are included in the counting as solvent exposed (e = s).
After removal of any aglyca (e.g. amino acids or lipids, which are part of the sequence in CarbBank), the remaining carbohydrate moiety was exported into the GlycoCT sequence format and subsequently stored in EUROCarbDB.
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As the ankyrin repeats are part of the sequences of p100 as well as p105, the precursor of p50, the existence of a common evolutionary ancestor for both, IκB and REL proteins is reasonable.
This seminar is part of the sequence for the BPP PhD program.
The arm thrust was part of the sequence, and the cane added a kind of exclamation point, but what Tharp congratulated him on, with the hint of a grin herself, was finishing on the count of eleven, just in time.
At the time Maupin insisted that this was not intended to be part of the sequence, even though it offered a résumé of what all the regular characters had been doing for the past 18 years.
Two "dummy" scans at the beginning of each run/task were part of the sequence to allow for signal saturation.
The peptides used were part of the sequence of structural or non structural (NS) proteins of HCV and of the bovine viral diarrheal virus (BVDV).
Two of them were part of the sequence of peptides 18 and 23 identified by MALDI TOF (Table 2).
The mature peptide of the E. faecalis pheromones is part of the sequence of the propeptide which anchors it to the membrane.
Statistically significant prediction for CpG islands was performed using the online predictor, which is part of the sequence manipulation suite at http://www.bioinformatics.org/SMS/index.html.html
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com