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Two residues in a protein are defined to interact with each other if the observed distance between any two atoms of the residues was less than the sum of their corresponding Van der Waals radii plus 1 [34].
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One hydrogen-bond acceptor and two hydrogen-bond donor features (radius 0.6 Å) were defined to interact with the hinge region.
However, they are usually defined to interact in semantic-restricted domains in which users are offered a limited number of options and functionalities.
Furthermore, a policy has to be defined how to interact with the transponders.
In iPfam, two domains are defined as interacting if and only if they are close enough in at least one PDB complex to form an interaction.
The degrees of connectivity are defined as: interacting with the design element during its construction (DoC #1); interacting with the design element in its final form to attach another component to it (DoC #2) or by working in the vicinity of it (DoC #3); and indirectly interacting with the design element through another worker (DoC #4).
When using compounds criteria, two targets are defined as interacting if they share a certain number of bound ligands above a certain pChEMBL value cutoff.
It cannot be excluded that other metabolic effects yet to be defined might interact with the cancerous process.
Regions of various phases are defined and allowed to grow or interact according to rules modeling gas-solid reactions.
However, there are many uncertainties – there will be influences that have yet to be defined, and for those that are defined we do not know how they interact with each other to influence the immune responses.
These are defined as two systems that interact with each other by forces of contact, resulting in a reduction in dimensionality and complexity.
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com